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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LIHC rs112503110 chr2:202213147 A/AT 0 190 13.53 12.73 0.37 KM Plot
LIHC rs112503793 chr1:224610429 G/A 0.000103 190 13.55 13.37 5.25 KM Plot
LIHC rs112520379 chr2:202101998 G/C 0 188 13.13 13.88 0.37 KM Plot
LIHC rs11253104 chr10:5379362 A/G 9.95E-5 192 5.7 13.08 20.07 KM Plot
LIHC rs112571188 chr3:10323127 C/T 1.84E-5 192 13.72 13.53 0.2 KM Plot
LIHC rs112685558 chr19:56194184 A/ACCACCT 0.0002 190 13.83 14.27 3.33 KM Plot
LIHC rs112703217 chr12:112275642 G/T 6.38E-6 192 12.57 14.98 4.03 KM Plot
LIHC rs112795740 chr1:224640679 G/A 0.000112 191 13.57 13.37 5.25 KM Plot
LIHC rs1127968 chr14:65399255 G/C 2.93E-9 189 13.35 13.45 0.63 KM Plot
LIHC rs11281227 chr4:44661349 G/GTAGGAAA 5.59E-6 189 3.4 13.35 14.8 KM Plot
LIHC rs112813112 chr20:61823809 G/A 4.32E-12 188 13.08 13.97 0.47 KM Plot
LIHC rs1128553 chr4:44704206 A/G 2.82E-6 192 3.37 13.55 16.07 KM Plot
LIHC rs11285816 chr4:44681795 CA/C 2.82E-6 192 3.37 13.55 16.07 KM Plot
LIHC rs112865361 chr3:125424831 C/T 0 188 13.78 12.03 0.75 KM Plot
LIHC rs112889279 chr21:44439519 C/CA 3.14E-6 188 2.7 12.43 13.83 KM Plot